• Login
     
    View Item 
    •   ORFEO Home
    • Royal Museum for Central Africa
    • RMCA publications
    • View Item
    •   ORFEO Home
    • Royal Museum for Central Africa
    • RMCA publications
    • View Item
    JavaScript is disabled for your browser. Some features of this site may not work without it.

    Phylogenomic resolution of the Ceratitis FARQ complex ( Diptera : Tephritidae )

    Authors
    Zhang, Y.
    De Meyer, M.
    Virgilio, M.
    Feng, S.
    Badji, K.
    Li, Z.
    Show allShow less
    Discipline
    Biological sciences
    Subject
    Invertebrates
    Audience
    Scientific
    Date
    2021
    Metadata
    Show full item record
    Description
    The Ceratitis FARQ complex (formerly FAR complex) includes four frugivorous tephritids, Ceratitis fasciventris, C. anonae, C. rosa and C. quilicii, the latter two causing important agricultural losses in Africa. Although FARQ species can be identified on the basis of subtle morphological differences, they cannot be resolved as mono- phyletic when trying phylogenetic tree reconstructions based on mitochondrial or nuclear gene fragments except for microsatellites. In this study, we used mitogenome and genome-wide SNPs to investigate the phylogenetic relationship within the complex as well as between all four Ceratitis subgenera. The analysis of 13 species supported the monophyly of the Ceratitis subgenera Ceratitis, Ceratalaspis, Pardalaspis, and recovered Pterandrus as paraphyletic but could not properly resolve species within the FARQ complex. Conversely, gene and species tree reconstructions based on 785,484 genome-wide SNPs could consistently resolve the FARQ taxa and provide insights into their phylogenetic relationships. Gene flow was detected by TreeMix analysis from C. quilicii to C. fasciventris, suggesting the existence of introgression events in the FARQ complex. Our results suggest that genome-wide SNPs represent a suitable tool for the molecular diagnosis of FARQ species and could possibly be used to develop rapid diagnostic methods or to trace the origins of intercepted samples.
    Citation
    Zhang, Y.; De Meyer, M.; Virgilio, M.; Feng, S.; Badji, K.; Li, Z. (2021). Phylogenomic resolution of the Ceratitis FARQ complex ( Diptera : Tephritidae ). , Molecular Phylogenetics and Evolution, DOI: 10.1016/j.ympev.2021.107160.
    Identifiers
    uri: https://orfeo.belnet.be/handle/internal/12651
    doi: http://dx.doi.org/10.1016/j.ympev.2021.107160
    Type
    Article
    Peer-Review
    Yes
    Language
    eng
    Links
    NewsHelpdeskBELSPO OA Policy

    Browse

    All of ORFEOCommunities & CollectionsBy Issue DateAuthorsTitlesDisciplinesThis CollectionBy Issue DateAuthorsTitlesDisciplines
     

    DSpace software copyright © 2002-2016  DuraSpace
    Send Feedback | Cookie Information
    Theme by 
    Atmire NV