• Login
     
    View Item 
    •   ORFEO Home
    • Royal Museum for Central Africa
    • RMCA publications
    • View Item
    •   ORFEO Home
    • Royal Museum for Central Africa
    • RMCA publications
    • View Item
    JavaScript is disabled for your browser. Some features of this site may not work without it.

    Valorizing xylaria using computer vision-based wood identification: a case study on the INERA-Yangambi xylarium

    View/Open
    Published (100.1Kb)
    Authors
    De Blaere, R.
    Van den Bulcke, J.
    Verwaeren, J.
    De Ridder, M.
    Monnoye, M.
    Hubau, W.
    De Mil, T.
    Lievens, K.
    Laurent, F.
    Angoboy Ilondea, B.
    Beeckman, H.
    Show allShow less
    Discipline
    Biological sciences
    Computer and information sciences
    Subject
    Wood biology
    Audience
    Scientific
    Date
    2024
    Publisher
    IUFRO
    Metadata
    Show full item record
    Description
    Xylaria provide crucial reference materials for botanical studies, wood anatomical research, and forensic investigations. However, the accuracy of specimen identification within these collections is not always guaranteed, as specimens with dubious origins can enter collections, risking research integrity. Ascertaining the taxonomy is therefore crucial. Although a full wood anatomical assessment could theoretically identify all specimens, this process would be impractically time-consuming, requiring years of intensive microtomy work. Artificial intelligence offers a faster, more economical solution. Computer vision-based wood identification uses wood images as diagnostic information to develop models that can distinguish timbers. This method enhances the reliability of xylaria, thereby increasing the trustworthiness of the research performed on them. The objective of this study was to classify 58 Congolese wood genera through precise multiclass classification. The Xception architecture was leveraged on macroscopic cross-sectional RGB images, utilizing the SmartWoodID database derived from the Tervuren xylarium as training data. A total of 1700 specimens were divided into training (80%) and test (20%) datasets while maintaining species balance. Images were cropped into square patches with a side length of 5.42mm. Five-fold crossvalidation was used for evaluation, and the most performant model was applied to the xylarium of the INERA-Yangambi research center. Performance was assessed by calculating recall scores for all genera across folds for all patches, and for aggregated results per specimen. The predicted genus for each specimen was determined by majority vote on patch predictions and compared to the specimen's recorded genus. In total, 193 specimens of the INERA-Yangambi xylarium were classified. Among these, 57 specimens were misclassified at the genus level. This research demonstrates that AI can significantly enhance the accuracy and reliability of xylaria, facilitating more dependable botanical and wood anatomical studies.
    Citation
    De Blaere, R.; Van den Bulcke, J.; Verwaeren, J.; De Ridder, M.; Monnoye, M.; Hubau, W.; De Mil, T.; Lievens, K.; Laurent, F.; Angoboy Ilondea, B.; Beeckman, H. (2024). Valorizing xylaria using computer vision-based wood identification: a case study on the INERA-Yangambi xylarium. , 26th IUFRO World Congress, 3536, IUFRO, DOI: https://iufro2024.com/book-of-abstracts/.
    Identifiers
    uri: https://orfeo.belnet.be/handle/internal/13767
    doi: https://iufro2024.com/book-of-abstracts/
    url: https://iufro2024.com/book-of-abstracts/
    Type
    Conference
    Peer-Review
    No
    Language
    eng
    Links
    NewsHelpdeskBELSPO OA Policy

    Browse

    All of ORFEOCommunities & CollectionsBy Issue DateAuthorsTitlesDisciplinesThis CollectionBy Issue DateAuthorsTitlesDisciplines
     

    DSpace software copyright © 2002-2016  DuraSpace
    Send Feedback | Cookie Information
    Theme by 
    Atmire NV