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    Phylogenomics of Psammodynastes and Buhoma (Elapoidea: Serpentes), with the description of a new Asian snake family.

    Authors
    Das, S.
    Greenbaum, E.
    Brecko, J.
    Pauwels, OSG.
    Ruane, S.
    Pirro, S.
    Merilä, J.
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    Discipline
    Biological sciences
    Subject
    Natural heritage Collections
    Audience
    Scientific
    Date
    2024
    Metadata
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    Description
    Asian mock vipers of the genus Psammodynastes and African forest snakes of the genus Buhoma are two genera belonging to the snake superfamily Elapoidea. The phylogenetic placements of Psammodynastes and Buhoma within Elapoidea has been extremely unstable which has resulted in their uncertain and debated taxonomy. We used ultraconserved elements and traditional nuclear and mitochondrial markers to infer the phylogenetic relationships of these two genera with other elapoids. Psammodynastes, for which a reference genome has been sequenced, were found, with strong branch support, to be a relatively early diverging split within Elapoidea that is sister to a clade consisting of Elapidae, Micrelapidae and Lamprophiidae. Hence, we allocate Psammodynastes to its own family, Psammodynastidae new family. However, the phylogenetic position of Buhoma could not be resolved with a high degree of confidence. Attempts to identify the possible sources of conflict in the rapid radiation of elapoid snakes suggest that both hybridisation/introgression during the rapid diversification, including possible ghost introgression, as well as incomplete lineage sorting likely have had a confounding role. The usual practice of combining mitochondrial loci with nuclear genomic data appears to mislead phylogeny reconstructions in rapid radiation scenarios, especially in the absence of genome scale data.
    Citation
    Das, S.; Greenbaum, E.; Brecko, J.; Pauwels, OSG.; Ruane, S.; Pirro, S.; Merilä, J. (2024). Phylogenomics of Psammodynastes and Buhoma (Elapoidea: Serpentes), with the description of a new Asian snake family.. , Scientific Reports, Vol. 14, 9489, DOI: https://doi.org/10.1038/s41598-024-60215-2.
    Identifiers
    uri: https://orfeo.belnet.be/handle/internal/13853
    doi: https://doi.org/10.1038/s41598-024-60215-2
    url: https://www.nature.com/articles/s41598-024-60215-2#citeas
    Type
    Article
    Peer-Review
    Yes
    Language
    eng
    Links
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